MA_141308g0010 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : ABC transporter B family member 19 OS=Arabidopsis thaliana (sp|q9ljx0|ab19b_arath : 325.0)

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_141308g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00048p00046670	PGP2,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00055p00102180	ABCB14,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
Adi_g021749	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20821	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g05763	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g07131	ABCB19,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g07510	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g12027	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g18810	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g33230	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g06806	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g18063	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g19105	ABCB19,...	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62055.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g01329	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.06G076400.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.10G031400.1	PGP13, Ceric.10G031400	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.14G049900.1	PGP11, Ceric.14G049900	subfamily ABCB transporter & original description:...	0.08	OrthoFinder output from all 47 species
Ceric.18G013800.1	Ceric.18G013800	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g06939	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g14063	PGP11	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g35993	PGP11	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g40237	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12428	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Gb_32487	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g18670.1	PGP21, LOC_Os01g18670	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
LOC_Os02g46680.1	PGP2, LOC_Os02g46680	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Lfl_g27273	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
MA_10434957g0010	PGP1, ABCB1, ATPGP1	ABC transporter B family member 1 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_126766g0010	PGP2	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_40328g0010	PGP20	ABC transporter B family member 20 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Msp_g17749	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g19766	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g04453	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g27262	PGP13	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g32847	PGP21	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g47037	PGP11	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g04001	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g07008	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g17867	PGP11	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035	PGP13	subfamily ABCB transporter & original description: CDS=555-4511	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197	No alias	subfamily ABCB transporter & original description: CDS=1-2220	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107	PGP2	subfamily ABCB transporter & original description: CDS=729-4781	0.01	OrthoFinder output from all 47 species
Sam_g24632	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g32980	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g36110	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g093650.3.1	Solyc03g093650	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Spa_g19381	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06699	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e014797_P002	Zm00001e014797	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Zm00001e017444_P002	PGP21, Zm00001e017444	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	5	89
IPR003439	ABC_transporter-like_ATP-bd	160	261

External Links

No external refs found!

MA_141308g0010 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation