MA_141559g0010


Description : no hits & (original description: none)


Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_141559g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00041060 evm_27.TU.AmTr_v1... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00045230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00063p00154030 ORG2, BHLH038,... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.02 OrthoFinder output from all 47 species
AT4G25400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G25410 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G51780 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g39845 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_26737 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_14352g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_321195g0010 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_68586g0010 BHLH101 transcription factor (bHLH). iron/copper homeostasis... 0.02 OrthoFinder output from all 47 species
MA_93509g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_93509g0020 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_938775g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc04g056535.1.1 Solyc04g056535 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc06g035490.3.1 Solyc06g035490 transcription factor (bHLH) 0.09 OrthoFinder output from all 47 species
Solyc09g074805.1.1 Solyc09g074805 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc10g079650.2.1 BHLH100, Solyc10g079650 transcription factor (bHLH). iron/copper homeostasis... 0.02 OrthoFinder output from all 47 species
Solyc10g079660.3.1 ORG2, BHLH038,... transcription factor (bHLH). iron/copper homeostasis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!