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  5. MA_14457g0010

MA_14457g0010 (AGO9)


Aliases : AGO9

Description : Protein argonaute 4A OS=Oryza sativa subsp. japonica (sp|q9sdg8|ago4a_orysj : 486.0)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_14457g0010
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00203090 AGO4, OCP11,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AT2G27880 AGO5 Argonaute family protein 0.03 OrthoFinder output from all 47 species
AT5G21030 No alias PAZ domain-containing protein / piwi domain-containing protein 0.05 OrthoFinder output from all 47 species
AT5G21150 AGO9 Argonaute family protein 0.03 OrthoFinder output from all 47 species
AT5G43810 PNH, AGO10, ZLL Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 OrthoFinder output from all 47 species
Aev_g10073 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06375 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05330 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35022.t1 AGO1, Aspi01Gene35022 siRNA-binding factor *(AGO2) of non-canonical RdDM... 0.02 OrthoFinder output from all 47 species
Dac_g09447 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22733 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
GSVIVT01025868001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
MA_85246g0010 AGO9 Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Nbi_g40097 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41760 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04951 AGO7, ZIP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29047 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Sam_g10517 No alias siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g008960.3.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.04 OrthoFinder output from all 47 species
Solyc06g073540.4.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.04 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Spa_g09278 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30415 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Tin_g08802 AGO1 regulatory protein *(AGO7) of transacTing siRNA pathway... 0.02 OrthoFinder output from all 47 species
Zm00001e016179_P001 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e041452_P004 AGO1, Zm00001e041452 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003165 Piwi 56 371
No external refs found!