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  5. MA_150049g0010

MA_150049g0010


Description : Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum (sp|p11670|prb1_tobac : 183.0)


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_150049g0010
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT1G50060 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
Ehy_g19657 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037000001 ATPR1, PR1, PR 1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
Gb_11047 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Gb_11050 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_11051 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Gb_20954 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.05 OrthoFinder output from all 47 species
Gb_20955 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
LOC_Os01g28450.1 ATPR1, PR1, PR... Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os01g28500.1 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54530.1 LOC_Os02g54530 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
LOC_Os05g51660.1 LOC_Os05g51660 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
MA_10270775g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
MA_9186130g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g12510.1 PRB1, ATPRB1 Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.05 OrthoFinder output from all 47 species
Nbi_g34072 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_21090V3.1 Pp3c18_21090 pathogenesis-related gene 1 0.07 OrthoFinder output from all 47 species
Ppi_g27336 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.03 OrthoFinder output from all 47 species
Solyc01g106620.2.1 PRB1, ATPRB1,... Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
Solyc09g007010.1.1 Solyc09g007010 Pathogenesis-related leaf protein 4 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc10g048100.3.1 Solyc10g048100 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Zm00001e016074_P001 Zm00001e016074 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Zm00001e016075_P001 Zm00001e016075 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Zm00001e032757_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 34 152
No external refs found!