MA_16561g0010


Description : Protein BPS1, chloroplastic OS=Arabidopsis thaliana (sp|q9lmm6|bps1_arath : 93.2)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_16561g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.03 OrthoFinder output from all 47 species
AT4G01360 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
AT4G11300 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
Adi_g009056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g024370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16067.t1 Aspi01Gene16067 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16068.t1 Aspi01Gene16068 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16069.t1 Aspi01Gene16069 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58350.t1 Aspi01Gene58350 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.03 OrthoFinder output from all 47 species
Ceric.1Z027800.1 Ceric.1Z027800 not classified & original description: pacid=50597254... 0.04 OrthoFinder output from all 47 species
Ceric.22G029100.1 Ceric.22G029100 not classified & original description: pacid=50615320... 0.02 OrthoFinder output from all 47 species
Ceric.22G030000.1 Ceric.22G030000 not classified & original description: pacid=50614551... 0.02 OrthoFinder output from all 47 species
Ceric.22G031800.1 Ceric.22G031800 not classified & original description: pacid=50614819... 0.05 OrthoFinder output from all 47 species
Ceric.22G032300.1 Ceric.22G032300 not classified & original description: pacid=50615347... 0.04 OrthoFinder output from all 47 species
Ceric.25G006400.1 BPS1, Ceric.25G006400 not classified & original description: pacid=50594262... 0.03 OrthoFinder output from all 47 species
Dcu_g02755 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g39932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019411001 ROH1 No description available 0.03 OrthoFinder output from all 47 species
Gb_18311 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_18312 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_35673 BPS1 Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g06440.1 LOC_Os11g06440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g30036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430865g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_11152g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_126973g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_130577g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_152437g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_85744g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g08592 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g31415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31153 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g38799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009073_P001 Zm00001e009073 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e024656_P001 Zm00001e024656 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 237 382
IPR008511 ROH1-like 78 224
No external refs found!