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  5. MA_166883g0010

MA_166883g0010 (PSBA)


Aliases : PSBA

Description : Photosystem II protein D1 OS=Vicia faba (sp|p13910|psba_vicfa : 134.0)


Gene families : OG0001107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_166883g0010
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00098500 PSBA Photosystem II protein D1 OS=Nephroselmis olivacea 0.03 OrthoFinder output from all 47 species
ATCG00020 PSBA photosystem II reaction center protein A 0.03 OrthoFinder output from all 47 species
Aev_g33560 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.05 OrthoFinder output from all 47 species
Aob_g01728 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0026.g023368 No alias not classified & original description: CDS=1-396 0.03 OrthoFinder output from all 47 species
Azfi_s0192.g057044 No alias not classified & original description: CDS=1-339 0.03 OrthoFinder output from all 47 species
Ceric.01G054300.1 PSBA, Ceric.01G054300 not classified & original description: pacid=50591444... 0.02 OrthoFinder output from all 47 species
Ceric.01G066400.1 PSBA, Ceric.01G066400 not classified & original description: pacid=50590620... 0.04 OrthoFinder output from all 47 species
Ceric.02G016000.1 PSBD, Ceric.02G016000 component *(PsbD/D2) of PS-II reaction center complex &... 0.04 OrthoFinder output from all 47 species
Ceric.02G046500.1 PSBA, Ceric.02G046500 not classified & original description: pacid=50584544... 0.04 OrthoFinder output from all 47 species
Ceric.03G055000.1 PSBA, Ceric.03G055000 not classified & original description: pacid=50572846... 0.03 OrthoFinder output from all 47 species
Ceric.05G039300.1 PSBA, Ceric.05G039300 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.05G040100.1 PSBA, Ceric.05G040100 component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.05G043300.1 PSBA, Ceric.05G043300 component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.06G028100.1 PSBA, Ceric.06G028100 not classified & original description: pacid=50620820... 0.04 OrthoFinder output from all 47 species
Ceric.07G016000.1 PSBA, Ceric.07G016000 not classified & original description: pacid=50626123... 0.04 OrthoFinder output from all 47 species
Ceric.07G060900.1 PSBA, Ceric.07G060900 component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.09G049700.1 PSBA, Ceric.09G049700 component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.12G058600.1 PSBA, Ceric.12G058600 not classified & original description: pacid=50600847... 0.02 OrthoFinder output from all 47 species
Ceric.16G061600.1 PSBA, Ceric.16G061600 not classified & original description: pacid=50589682... 0.02 OrthoFinder output from all 47 species
Ceric.18G054200.1 PSBA, Ceric.18G054200 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z020700.1 PSBA, Ceric.1Z020700 component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.22G078100.1 PSBA, Ceric.22G078100 component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.28G022100.1 PSBA, Ceric.28G022100 not classified & original description: pacid=50570095... 0.03 OrthoFinder output from all 47 species
Ceric.29G003100.1 PSBA, Ceric.29G003100 component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.29G032300.1 PSBD, Ceric.29G032300 component *(PsbD/D2) of PS-II reaction center complex &... 0.04 OrthoFinder output from all 47 species
Ceric.33G038500.1 PSBA, Ceric.33G038500 component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.35G011500.1 PSBA, Ceric.35G011500 not classified & original description: pacid=50581506... 0.04 OrthoFinder output from all 47 species
Ceric.36G044800.1 PSBA, Ceric.36G044800 not classified & original description: pacid=50568302... 0.04 OrthoFinder output from all 47 species
Dde_g00539 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01029661001 PSBD Photosystem II D2 protein OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Gb_03955 PSBA Photosystem II protein D1 OS=Cryptomeria japonica... 0.05 OrthoFinder output from all 47 species
Gb_09035 PSBA Photosystem II protein D1 OS=Cryptomeria japonica... 0.05 OrthoFinder output from all 47 species
Gb_18604 PSBA Photosystem II protein D1 OS=Adiantum capillus-veneris... 0.05 OrthoFinder output from all 47 species
Gb_20129 PSBA Photosystem II protein D1 OS=Zygnema circumcarinatum... 0.03 OrthoFinder output from all 47 species
LOC_Os04g16872.1 PSBD, LOC_Os04g16872 component PsbD/D2 of PS-II reaction center complex 0.04 OrthoFinder output from all 47 species
LOC_Os10g21192.1 PSBA, LOC_Os10g21192 component PsbA/D1 of PS-II reaction center complex 0.04 OrthoFinder output from all 47 species
LOC_Os12g19580.1 PSBA, LOC_Os12g19580 Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
MA_167313g0010 PSBA Photosystem II protein D1 OS=Vicia faba... 0.02 OrthoFinder output from all 47 species
Mp1g09910.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.04 OrthoFinder output from all 47 species
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.04 OrthoFinder output from all 47 species
Ore_g00373 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.05 OrthoFinder output from all 47 species
Ore_g12399 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g01211 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Sam_g05154 No alias component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Smo137879 PSBD Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Smo139195 PSBA Photosystem II protein D1 OS=Phalaenopsis aphrodite... 0.03 OrthoFinder output from all 47 species
Zm00001e036844_P001 PSBA, Zm00001e036844 Photosystem II protein D1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 2 121
No external refs found!