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  5. MA_178775g0020

MA_178775g0020 (EXPA8, ATHEXP ALPHA...)


Aliases : EXPA8, ATHEXP ALPHA 1.11, EXP8, ATEXPA8, ATEXP8

Description : alpha-class expansin


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_178775g0020
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.02 OrthoFinder output from all 47 species
AT3G29030 EXP5, ATHEXP... expansin A5 0.03 OrthoFinder output from all 47 species
AT4G01630 ATHEXP ALPHA... expansin A17 0.02 OrthoFinder output from all 47 species
AT4G38400 ATEXPL2, EXPL2,... expansin-like A2 0.02 OrthoFinder output from all 47 species
Als_g04181 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20979 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00435.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03743.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03745.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03746.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03747.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03879.t1 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04997.t1 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40020.t1 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40354.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41819.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51050.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G000500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g31511 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004595001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.04 OrthoFinder output from all 47 species
GSVIVT01005917001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01013208001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01032681001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Gb_10700 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Gb_10701 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Gb_10702 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Gb_10703 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g21820.1 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g01920.1 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os07g31390.1 ATEXPL2, EXPL2,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os08g44790.1 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40090.1 ATHEXP BETA 1.4,... Expansin-B9 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_114349g0010 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_166764g0010 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_229510g0010 EXPA2, ATHEXP... Expansin-A2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_37884g0010 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_467939g0010 ATEXPL2, EXPL2,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
MA_474624g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_4979g0010 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_78155g0010 EXPB1, ATEXPB1,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_9323664g0010 EXPB1, ATEXPB1,... Expansin-B3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Mp3g06900.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009021 ATHEXP ALPHA... not classified & original description: CDS=1-1083 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022152 EXPB3, ATEXPB3,... not classified & original description: CDS=169-1023 0.03 OrthoFinder output from all 47 species
Solyc03g115300.2.1 ATHEXP ALPHA ... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc06g060970.2.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Solyc08g077330.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g077900.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Tin_g30401 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002243_P002 ATEXLA3, EXPL3,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037877_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 19 105
No external refs found!