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  5. MA_179294g0010

MA_179294g0010 (VFB4, SKIP2)


Aliases : VFB4, SKIP2

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: MA_179294g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00198p00016850 VFB3,... Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Adi_g024944 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g02301 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g14932 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Aop_g19984 VFB1 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g30738 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Len_g00625 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g13942 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Msp_g01594 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g06190 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g09628 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 30 68
IPR001611 Leu-rich_rpt 116 140
No external refs found!