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  5. MA_181940g0010

MA_181940g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_181940g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G20823 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G49210 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G07040 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g048849 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g09630 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12179 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g12633 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g02144 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g13903 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g23533 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g23659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59747 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g22041 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g23371 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.03G066200.1 Ceric.03G066200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.07G057600.1 Ceric.07G057600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.12G015900.1 Ceric.12G015900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.22G020900.1 ATL43, Ceric.22G020900 not classified & original description: pacid=50614198... 0.03 OrthoFinder output from all 47 species
Ceric.25G002800.1 Ceric.25G002800 not classified & original description: pacid=50594229... 0.03 OrthoFinder output from all 47 species
Ceric.25G031000.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g18286 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
LOC_Os04g16970.1 LOC_Os04g16970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07140.1 LOC_Os05g07140 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os09g20980.1 LOC_Os09g20980 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g28782 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g57067 ATL4H not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39367 RHA3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10021g0010 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_144298g0010 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_15116g0010 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_391590g0010 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4795437g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g09561 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g12500 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g44562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g12750 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g37451 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc01g006910.4.1 Solyc01g006910 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g007530.2.1 Solyc11g007530 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Tin_g38882 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Zm00001e000396_P001 Zm00001e000396 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e009766_P001 Zm00001e009766 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e015445_P001 BRH1, Zm00001e015445 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015470_P001 ATL8, Zm00001e015470 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016474_P001 Zm00001e016474 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e029032_P001 Zm00001e029032 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e038229_P001 Zm00001e038229 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039314_P001 Zm00001e039314 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 113 156
No external refs found!