MA_18470g0040

Description : no hits & (original description: none)

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_18470g0040
Cluster	HCCA: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00183520	evm_27.TU.AmTr_v1...	Basic endochitinase OS=Vitis vinifera	0.04	OrthoFinder output from all 47 species
Aev_g05797	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene23821.t1	ATEP3, EP3,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene32119.t1	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01007191001	No alias	No description available	0.02	OrthoFinder output from all 47 species
Gb_03376	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Gb_29991	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os05g33130.1	HCHIB, B-CHI,...	Chitinase 2 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Lfl_g15813	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10313114g0010	HCHIB, B-CHI,...	Endochitinase B OS=Nicotiana tabacum...	0.04	OrthoFinder output from all 47 species
MA_10431378g0010	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_114934g0010	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
MA_170598g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
MA_19732g0010	ATEP3, EP3,...	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.07	OrthoFinder output from all 47 species
MA_9952704g0010	HCHIB, B-CHI,...	Endochitinase OS=Phaseolus vulgaris...	0.05	OrthoFinder output from all 47 species
Ppi_g57704	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60891	HCHIB, B-CHI,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc10g055800.2.1	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008061	chitin binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001002	Chitin-bd_1	37	73
IPR000726	Glyco_hydro_19_cat	104	136

External Links

No external refs found!

MA_18470g0040

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation