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  5. MA_185098g0010

MA_185098g0010 (EMB2261)


Aliases : EMB2261

Description : Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana (sp|q5g1t1|pp272_arath : 660.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_185098g0010
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Adi_g003294 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000420001 MEF22 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01008757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
GSVIVT01012174001 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.03 OrthoFinder output from all 47 species
GSVIVT01016874001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
GSVIVT01026881001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
GSVIVT01031265001 LPA66 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
GSVIVT01033004001 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 OrthoFinder output from all 47 species
Gb_00206 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.09 OrthoFinder output from all 47 species
Gb_00409 No alias RNA editing factor (SLO2) 0.06 OrthoFinder output from all 47 species
Gb_01648 No alias Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Gb_02065 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_02998 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_03136 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.07 OrthoFinder output from all 47 species
Gb_03626 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Gb_03927 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_04533 CRR22 RNA editing factor (OTP82) 0.07 OrthoFinder output from all 47 species
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.09 OrthoFinder output from all 47 species
Gb_05127 No alias Pentatricopeptide repeat-containing protein At3g26540... 0.07 OrthoFinder output from all 47 species
Gb_05939 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_06523 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_06899 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.08 OrthoFinder output from all 47 species
Gb_07635 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.07 OrthoFinder output from all 47 species
Gb_08036 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.08 OrthoFinder output from all 47 species
Gb_08253 REME1 RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_08560 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.07 OrthoFinder output from all 47 species
Gb_08619 No alias RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_08745 CRR22 RNA editing factor (OTP82) 0.1 OrthoFinder output from all 47 species
Gb_08964 CRR2 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_09361 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_09654 No alias RNA editing factor (MEF13) 0.05 OrthoFinder output from all 47 species
Gb_09794 No alias RNA editing factor (MEF7). RNA editing factor (MEF13) 0.04 OrthoFinder output from all 47 species
Gb_10133 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.09 OrthoFinder output from all 47 species
Gb_10151 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Gb_10158 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_10985 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.1 OrthoFinder output from all 47 species
Gb_11025 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Gb_11039 VAC1, ECB2, ATECB2 RNA editing factor (CRR21) 0.13 OrthoFinder output from all 47 species
Gb_11222 No alias Putative pentatricopeptide repeat-containing protein... 0.14 OrthoFinder output from all 47 species
Gb_11545 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_11667 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.12 OrthoFinder output from all 47 species
Gb_11905 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_12004 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_12240 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.09 OrthoFinder output from all 47 species
Gb_12554 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.12 OrthoFinder output from all 47 species
Gb_12556 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
Gb_13221 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Gb_13717 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 OrthoFinder output from all 47 species
Gb_14459 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_15235 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_15588 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Gb_15643 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
Gb_15666 No alias Putative pentatricopeptide repeat-containing protein... 0.11 OrthoFinder output from all 47 species
Gb_16102 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.08 OrthoFinder output from all 47 species
Gb_16366 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.1 OrthoFinder output from all 47 species
Gb_16515 No alias RNA editing factor (MEF11) 0.05 OrthoFinder output from all 47 species
Gb_16828 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Gb_16848 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_16955 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_17094 CRR22 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_17177 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_17294 CRR2 RNA editing factor (MEF3) 0.05 OrthoFinder output from all 47 species
Gb_18149 CRR2 OTP70 plastidial RNA splicing factor 0.07 OrthoFinder output from all 47 species
Gb_18263 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_18436 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Gb_18600 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.09 OrthoFinder output from all 47 species
Gb_18788 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
Gb_18914 CRR2 Pentatricopeptide repeat-containing protein At3g57430,... 0.08 OrthoFinder output from all 47 species
Gb_19828 No alias RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_20266 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_20572 CRR22 RNA editing factor (CRR21) 0.06 OrthoFinder output from all 47 species
Gb_20774 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_21055 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Gb_21435 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
Gb_21965 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.08 OrthoFinder output from all 47 species
Gb_22288 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
Gb_22769 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_23267 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_23605 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_23924 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_23967 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_24126 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
Gb_24755 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_25283 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_25555 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.09 OrthoFinder output from all 47 species
Gb_25604 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_26311 No alias Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Gb_26581 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.1 OrthoFinder output from all 47 species
Gb_26651 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.08 OrthoFinder output from all 47 species
Gb_26689 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.08 OrthoFinder output from all 47 species
Gb_26695 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_27469 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_27833 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.08 OrthoFinder output from all 47 species
Gb_28037 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_28279 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.09 OrthoFinder output from all 47 species
Gb_28902 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.06 OrthoFinder output from all 47 species
Gb_29028 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_29466 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
Gb_29534 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 OrthoFinder output from all 47 species
Gb_29868 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_29879 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.08 OrthoFinder output from all 47 species
Gb_29990 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_30523 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Gb_30661 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_30732 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 OrthoFinder output from all 47 species
Gb_31795 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.08 OrthoFinder output from all 47 species
Gb_32451 CRR22 Pentatricopeptide repeat-containing protein At3g63370,... 0.05 OrthoFinder output from all 47 species
Gb_32453 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Gb_32456 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.13 OrthoFinder output from all 47 species
Gb_33117 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_33294 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 OrthoFinder output from all 47 species
Gb_33367 No alias RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_33411 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.06 OrthoFinder output from all 47 species
Gb_33719 No alias RNA editing factor (OTP82) 0.07 OrthoFinder output from all 47 species
Gb_33959 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_34297 CRR22 RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_34969 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_35395 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_35599 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.09 OrthoFinder output from all 47 species
Gb_35645 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.05 OrthoFinder output from all 47 species
Gb_35793 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_36085 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_36806 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_37176 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_37516 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_37624 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.07 OrthoFinder output from all 47 species
Gb_37820 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.1 OrthoFinder output from all 47 species
Gb_38297 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_38897 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_39440 CRR22 Pentatricopeptide repeat-containing protein At1g08070,... 0.06 OrthoFinder output from all 47 species
Gb_39558 No alias Putative pentatricopeptide repeat-containing protein... 0.08 OrthoFinder output from all 47 species
Gb_40303 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
Gb_40380 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_40472 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_40680 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_41233 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_41325 CRR22 RNA editing factor (MEF19) 0.06 OrthoFinder output from all 47 species
LOC_Os04g09530.1 LOC_Os04g09530 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Ore_g01992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03200 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24442 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099000.1.1 Solyc01g099000 Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
Solyc02g005280.1.1 Solyc02g005280 Pentatricopeptide repeat-containing protein At1g50270... 0.03 OrthoFinder output from all 47 species
Solyc02g079260.2.1 Solyc02g079260 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc02g093380.1.1 Solyc02g093380 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc03g007840.1.1 Solyc03g007840 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc03g115790.1.1 CRR28, Solyc03g115790 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc03g116000.1.1 Solyc03g116000 Pentatricopeptide repeat-containing protein At3g47530... 0.05 OrthoFinder output from all 47 species
Solyc04g009000.1.1 Solyc04g009000 RNA editing factor (SLO2) 0.05 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Solyc09g007040.1.1 Solyc09g007040 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Solyc09g059575.1.1 Solyc09g059575 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc09g075170.1.1 Solyc09g075170 Pentatricopeptide repeat-containing protein At3g62890... 0.03 OrthoFinder output from all 47 species
Solyc10g080220.2.1 Solyc10g080220 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Solyc12g042400.1.1 SLO1, Solyc12g042400 Pentatricopeptide repeat-containing protein At2g29760,... 0.04 OrthoFinder output from all 47 species
Solyc12g099620.1.1 Solyc12g099620 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Spa_g02164 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g05942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 132
IPR002885 Pentatricopeptide_repeat 453 501
IPR002885 Pentatricopeptide_repeat 252 299
IPR002885 Pentatricopeptide_repeat 353 399
IPR002885 Pentatricopeptide_repeat 555 602
IPR032867 DYW_dom 728 852
IPR002885 Pentatricopeptide_repeat 629 654
IPR002885 Pentatricopeptide_repeat 153 175
No external refs found!