Aliases : LBD40
Description : transcription factor (AS2/LOB)
Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00079p00088960 | LBD41,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00137p00051070 | LBD39,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00137p00087340 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G68510 | LBD42 | LOB domain-containing protein 42 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G49940 | LBD38 | LOB domain-containing protein 38 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036525 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g041713 | LBD37, ASL39 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g082772 | LBD37, ASL39 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086054 | LBD38 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g108649 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g08245 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05217 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g20695 | LBD37, ASL39 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11822 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.08G017400.1 | LBD38, Ceric.08G017400 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G029400.1 | LBD38, Ceric.31G029400 | AS2/LOB-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14411 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g15482 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008284001 | LBD40 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009360001 | LBD38 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011895001 | LBD41 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01031035001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037853001 | LBD38 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g03890.1 | LBD41, LOC_Os01g03890 | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g41330.1 | LBD37, ASL39,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g17305 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_223267g0010 | LBD40 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_70989g0010 | LBD40 | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g01919 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g08646 | LBD39 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005129_P001 | LBD37, ASL39,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e017028_P001 | LBD40, Zm00001e017028 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 4 | 100 |
| No external refs found! |
