MA_20168g0010


Description : Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana (sp|q9lw32|pp258_arath : 553.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_20168g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g008596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g012988 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g104656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44680 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g14718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19294 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61269 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene19894.t1 Aspi01Gene19894 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0151.g053373 No alias not classified & original description: CDS=1-2523 0.02 OrthoFinder output from all 47 species
Cba_g31516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G039500.1 Ceric.05G039500 not classified & original description: pacid=50577997... 0.04 OrthoFinder output from all 47 species
Ceric.23G046500.1 Ceric.23G046500 not classified & original description: pacid=50610423... 0.03 OrthoFinder output from all 47 species
Dac_g04703 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07040 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18942 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23537 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36368 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g50257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010223001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Gb_03473 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_03571 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_03997 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Gb_04420 OTP86 Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
Gb_05647 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_07723 OTP84 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_07754 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_09410 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_09741 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_10157 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_11036 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Gb_14133 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_19299 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_20187 DOT4 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
Gb_20749 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_21054 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_22656 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_23083 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_23085 No alias RNA editing factor (MEF19) 0.03 OrthoFinder output from all 47 species
Gb_24928 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_25582 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_27176 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Gb_27454 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Gb_28288 CRR22 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_29880 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Gb_30004 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Gb_33374 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
Gb_35042 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_37102 OTP84 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_38232 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_38248 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_38417 CRR2 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Gb_40380 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_40436 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Gb_41454 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.03 OrthoFinder output from all 47 species
Lfl_g07663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07668 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12786 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05273 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019665 No alias not classified & original description: CDS=1-372 0.02 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13838 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g21433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39952 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g23504 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06463 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11102 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12995 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45240 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 415 539
IPR002885 Pentatricopeptide_repeat 216 241
IPR002885 Pentatricopeptide_repeat 317 340
IPR002885 Pentatricopeptide_repeat 242 289
IPR002885 Pentatricopeptide_repeat 141 188
IPR002885 Pentatricopeptide_repeat 40 76
No external refs found!