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  5. MA_203210g0010

MA_203210g0010 (PP2-B15, AtPP2-B15)


Aliases : PP2-B15, AtPP2-B15

Description : F-box protein PP2-B15 OS=Arabidopsis thaliana (sp|o80494|p2b15_arath : 149.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_203210g0010
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00115850 PP2-A15,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.04 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.03 OrthoFinder output from all 47 species
Ala_g32123 AtPP2-B2, PP2-B2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05608 AtPP2-A13, PP2-A13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55186.t1 AtPP2-B8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064518 No alias not classified & original description: CDS=191-1105 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064522 No alias not classified & original description: CDS=100-843 0.02 OrthoFinder output from all 47 species
Azfi_s2399.g111181 No alias not classified & original description: CDS=192-1106 0.03 OrthoFinder output from all 47 species
LOC_Os02g56750.1 AtPP2-B1,... F-box protein At2g02240 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g56800.1 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g25665 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430103g0010 AtPP2-B10, PP2-B10 F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_5038g0010 ATPP2-B11, PP2-B11 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g11862 PP2-A11, AtPP2-A11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39124 AtPP2-B10, PP2-B10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g098200.2.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e002143_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Zm00001e016195_P001 AtPP2-B1,... F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e023618_P002 ATPP2-B11,... Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e040260_P002 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 20 63
IPR025886 PP2-like 114 229
No external refs found!