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  5. MA_20853g0010

MA_20853g0010


Description : pectin methylesterase


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_20853g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G47500 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g11634 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12395 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31249 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30602.t1 Aspi01Gene30602 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001228 No alias pectin methylesterase & original description: CDS=1-1122 0.03 OrthoFinder output from all 47 species
Cba_g11546 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G037100.1 Ceric.13G037100 not classified & original description: pacid=50635930... 0.04 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44261 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31652 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39760.1 LOC_Os09g39760 pectin methylesterase 0.12 OrthoFinder output from all 47 species
Len_g29036 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
MA_28575g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Nbi_g00669 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10459 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60345 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g02095 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29524 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 93 380
No external refs found!