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  5. MA_22853g0010

MA_22853g0010


Description : Reticulon-like protein B21 OS=Arabidopsis thaliana (sp|q56x72|rtnls_arath : 166.0)


Gene families : OG0003467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003467_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_22853g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
AMTR_s00065p00202980 evm_27.TU.AmTr_v1... Reticulon-like protein B21 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
AT2G20590 No alias Reticulon family protein 0.07 OrthoFinder output from all 47 species
AT4G28430 No alias Reticulon family protein 0.02 OrthoFinder output from all 47 species
Als_g59860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0030.g024361 No alias not classified & original description: CDS=126-2093 0.05 OrthoFinder output from all 47 species
Cba_g05841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G033400.1 Ceric.35G033400 not classified & original description: pacid=50581205... 0.03 OrthoFinder output from all 47 species
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
Gb_25024 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g19990.1 LOC_Os02g19990 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Len_g21192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Nbi_g18960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007280 No alias not classified & original description: CDS=1-1662 0.05 OrthoFinder output from all 47 species
Sam_g35317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g053700.4.1 Solyc07g053700 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g02418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09371 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51972 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024730_P001 Zm00001e024730 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 295 449
No external refs found!