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  5. MA_28575g0010

MA_28575g0010


Description : pectin methylesterase


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_28575g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00035900 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G05310 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G07430 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G61680 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g046688 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38864 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31249 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G007100.1 Ceric.11G007100 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007600.1 Ceric.11G007600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007700.1 Ceric.11G007700 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.11G007900.1 Ceric.11G007900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037000.1 Ceric.13G037000 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037100.1 Ceric.13G037100 not classified & original description: pacid=50635930... 0.04 OrthoFinder output from all 47 species
Ceric.13G037300.1 Ceric.13G037300 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.13G037700.1 Ceric.13G037700 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.13G037800.1 Ceric.13G037800 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z239300.1 Ceric.1Z239300 pectin methylesterase & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.36G035900.1 Ceric.36G035900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41518 No alias Probable pectinesterase 8 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_41519 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_19196g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_20853g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_6149868g0010 No alias pectin methylesterase 0.07 OrthoFinder output from all 47 species
Nbi_g12594 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10459 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60345 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 152 441
No external refs found!