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  5. MA_28961g0020

MA_28961g0020


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_28961g0020

Target Alias Description ECC score Gene Family Method Actions
AT1G26260 CIB5 cryptochrome-interacting basic-helix-loop-helix 5 0.03 OrthoFinder output from all 47 species
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.03 OrthoFinder output from all 47 species
Aob_g03428 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05211 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04843.t1 LRL3, Aspi01Gene04843 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33079.t1 UNE12, Aspi01Gene33079 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G021400.1 CIB5, Ceric.22G021400 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dde_g08656 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08372 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06182 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os08g39630.1 LOC_Os08g39630 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os08g41320.1 LOC_Os08g41320 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Nbi_g03697 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18942 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43162 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pnu_g13956 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48191 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g049770.1.1 Solyc10g049770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e006042_P001 Zm00001e006042 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e015610_P001 RHD6, Zm00001e015610 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e018857_P002 Zm00001e018857 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006480 N-terminal protein amino acid methylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 132 179
No external refs found!