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MA_310797g0010


Description : 50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana (sp|q9ly66|rk1_arath : 139.0)


Gene families : OG0002232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_310797g0010
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00035950 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Adi_g083284 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aev_g11306 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g31675 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g11179 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.36G042400.1 Ceric.36G042400 component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre02.g088900 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Dac_g00779 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g06155 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dde_g12366 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01032196001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Len_g24587 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Lfl_g03897 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g19309 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Mp1g07500.1 No alias component psRPL1 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Msp_g12689 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g11958 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ppi_g41124 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023589 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Smo143134 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Spa_g16769 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e031570_P001 Zm00001e031570 component psRPL1 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 21 90
No external refs found!