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  5. MA_3179g0020

MA_3179g0020 (SPL8)


Aliases : SPL8

Description : transcription factor (SBP)


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3179g0020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00198330 AtSPL9, SPL9,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.03 OrthoFinder output from all 47 species
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.03 OrthoFinder output from all 47 species
AT3G15270 SPL5 squamosa promoter binding protein-like 5 0.03 OrthoFinder output from all 47 species
AT5G43270 SPL2 squamosa promoter binding protein-like 2 0.02 OrthoFinder output from all 47 species
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.03 OrthoFinder output from all 47 species
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.03 OrthoFinder output from all 47 species
Adi_g010861 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17452 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22799 SPL13, SPL13A SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11381 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47133 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26421.t1 SPL8, Aspi01Gene26421 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22348 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020578001 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
GSVIVT01032239001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
LOC_Os01g69830.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_10427464g0040 SPL1R2, ATSPL14,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Pir_g45078 SPL7, ATSPL7 regulatory protein *(SPL7) of copper homeostasis &... 0.02 OrthoFinder output from all 47 species
Pir_g48701 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48821 SPL13, SPL13A SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524 SPL2 SBP-type transcription factor & original description: CDS=1-1641 0.02 OrthoFinder output from all 47 species
Solyc01g090730.3.1 SPL8, Solyc01g090730 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 273 346
No external refs found!