Description : IMB1 nucleocytoplasmic import karyopherin
Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_34778g0010 | |
| Cluster | HCCA: Cluster_198 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00252p00011130 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G08943 | No alias | ARM repeat superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g102316 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g102317 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g06365 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g04439 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G004800.1 | Ceric.10G004800 | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G014800.1 | Ceric.28G014800 | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre01.g034000 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g28510.4 | LOC_Os05g28510 | IMB1 nucleocytoplasmic import karyopherin | 0.04 | OrthoFinder output from all 47 species | |
| Len_g02901 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22836 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g30274 | No alias | nucleocytoplasmic import karyopherin *(IMB1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031516_P001 | Zm00001e031516 | IMB1 nucleocytoplasmic import karyopherin | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001494 | Importin-beta_N | 70 | 149 |
| No external refs found! |
