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  5. MA_373963g0010

MA_373963g0010


Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_373963g0010
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267830 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT1G49210 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G17450 RHA3A RING-H2 finger A3A 0.02 OrthoFinder output from all 47 species
AT2G34000 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35910 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G11110 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G18773 No alias RING/U-box superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G61460 BRH1 brassinosteroid-responsive RING-H2 0.03 OrthoFinder output from all 47 species
AT3G62690 ATL5 AtL5 0.03 OrthoFinder output from all 47 species
AT4G09100 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G35480 RHA3B RING-H2 finger A3B 0.04 OrthoFinder output from all 47 species
AT4G38140 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G01880 No alias RING/U-box superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G17600 No alias RING/U-box superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G41400 No alias RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
Aev_g01255 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g03271 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Aev_g39254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13710 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g38020 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07191.t1 Aspi01Gene07191 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0091.g042816 No alias not classified & original description: CDS=1-813 0.02 OrthoFinder output from all 47 species
Cba_g32773 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.07G057800.1 ATL6, Ceric.07G057800 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.25G039000.1 Ceric.25G039000 not classified & original description: pacid=50594534... 0.03 OrthoFinder output from all 47 species
Ceric.26G027500.1 Ceric.26G027500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.36G022800.1 Ceric.36G022800 not classified & original description: pacid=50568753... 0.02 OrthoFinder output from all 47 species
Ceric.36G022900.1 Ceric.36G022900 not classified & original description: pacid=50568300... 0.02 OrthoFinder output from all 47 species
Dac_g03092 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06243 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g10168 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g33448 MEE16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g41851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08169 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g00708 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01030125001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_35824 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_40635 RHA2A RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
Gb_40644 BRH1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g20930.1 ATL3, LOC_Os01g20930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g64620.1 LOC_Os01g64620 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g49710.1 LOC_Os02g49710 IDF1 iron uptake IRT1-ubiquitin ligase 0.04 OrthoFinder output from all 47 species
LOC_Os06g45580.1 RHA3A, LOC_Os06g45580 RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g06560.1 LOC_Os07g06560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os08g06090.1 RHA3B, LOC_Os08g06090 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g38460.1 XERICO, LOC_Os08g38460 ubiquitin protein ligase (XERICO) 0.02 OrthoFinder output from all 47 species
LOC_Os09g30160.1 XERICO, LOC_Os09g30160 ubiquitin protein ligase (XERICO) 0.02 OrthoFinder output from all 47 species
LOC_Os11g47690.1 LOC_Os11g47690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g42540.1 LOC_Os12g42540 RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g00032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20513 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Len_g29915 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g05980 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_10436650g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_15246g0010 BRH1 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_1623327g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_223372g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_51630g0010 No alias RING-H2-class E3 ligase 0.08 OrthoFinder output from all 47 species
MA_69343g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_711804g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_895676g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Msp_g00907 RHA3A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02852 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g14483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25585 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g30955 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02997 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03091 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18570 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07697 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g34706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 OrthoFinder output from all 47 species
Solyc01g081040.4.1 Solyc01g081040 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc02g082420.3.1 Solyc02g082420 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc06g063110.3.1 Solyc06g063110 RING-H2-class E3 ligase 0.09 OrthoFinder output from all 47 species
Solyc08g008080.1.1 BRH1, Solyc08g008080 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g089890.1.1 Solyc09g089890 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc10g008080.3.1 Solyc10g008080 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g081780.3.1 Solyc10g081780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g094385.1.1 Solyc12g094385 E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g07577 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g41285 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g51562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53066 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05338 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.06 OrthoFinder output from all 47 species
Tin_g31919 BRH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e001923_P001 ATL3, Zm00001e001923 RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e002233_P001 Zm00001e002233 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007129_P001 Zm00001e007129 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e017960_P001 RHA3A, Zm00001e017960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018028_P001 Zm00001e018028 RING-H2-class E3 ligase 0.07 OrthoFinder output from all 47 species
Zm00001e029032_P001 Zm00001e029032 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e031874_P001 Zm00001e031874 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032838_P001 Zm00001e032838 RING-H2-class E3 ligase 0.08 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e041385_P001 Zm00001e041385 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 128
No external refs found!