Aliases : COB
Description : COB cellulose microfibrils and hemicellulose interaction protein
Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00083860 | COB,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00047p00216570 | IRX6, COBL4,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G15630 | IRX6, COBL4 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G49270 | COBL9, MRH4, SHV2, DER9 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g021949 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g021950 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g115193 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g10925 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g36598 | IRX6, COBL4 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g25247 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g00864 | No alias | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04400 | COBL11 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g48554 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g05189 | COBL10 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g19904 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g11523 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18626 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03097.t1 | COBL1, Aspi01Gene03097 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene05801.t1 | SEB1, COBL7,... | regulatory protein *(COB) of cellulose-hemicellulose... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene09022.t1 | COBL1, Aspi01Gene09022 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36649.t1 | COBL11, Aspi01Gene36649 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G011700.1 | SEB1, COBL7,... | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G061400.1 | COB, Ceric.33G061400 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g00727 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40673 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008128001 | COB | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012641001 | COBL10 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024110001 | COB | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024111001 | COBL2 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036565001 | IRX6, COBL4 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036566001 | COB | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_25603 | COBL1 | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g30250.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g30260.1 | COBL1, LOC_Os03g30260 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g45700.1 | COBL6, LOC_Os04g45700 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g32110.1 | COB, LOC_Os05g32110 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g41320.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g49080.1 | SEB1, COBL7,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16254 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431440g0020 | COBL1 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g17600.1 | COBL11 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g18890.1 | COBL10 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g06600.1 | COBL1 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g21524 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28352 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28453 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g34445 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_14561V3.1 | Pp3c4_14561 | No annotation | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g06843 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g52658 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0125.g021681 | IRX6, COBL4 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0223.g026278 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g103860.4.1 | COBL6, Solyc01g103860 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g089130.4.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g070440.4.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g114880.3.1 | IRX6, COBL4,... | COBRA-like protein 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g114890.4.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114900.3.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114910.4.1 | COB, Solyc03g114910 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g075540.1.1 | SEB1, COBL7,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12333 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g29852 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001386_P001 | SEB1, COBL7,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035505_P001 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038043_P001 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0010215 | cellulose microfibril organization | IEA | Interproscan |
| CC | GO:0031225 | obsolete anchored component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006918 | COBRA_pln | 58 | 221 |
| No external refs found! |
