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MA_41001g0010 (RHC2A)


Aliases : RHC2A

Description : Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana (sp|o22283|rhc2a_arath : 97.1)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_41001g0010
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g44240.1 LOC_Os01g44240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g47682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15447 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g35084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 157
No external refs found!