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  5. MA_470025g0010

MA_470025g0010


Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana (sp|q7y211|pp285_arath : 585.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_470025g0010

Target Alias Description ECC score Gene Family Method Actions
Gb_02060 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_02864 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_04417 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.05 OrthoFinder output from all 47 species
Gb_05264 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_07336 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Gb_08118 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.05 OrthoFinder output from all 47 species
Gb_08744 CRR22 RNA editing factor (OTP82) 0.11 OrthoFinder output from all 47 species
Gb_09361 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_12555 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_13227 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_14403 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.09 OrthoFinder output from all 47 species
Gb_14445 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_15507 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Gb_15644 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_15797 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_18859 CRR2 Pentatricopeptide repeat-containing protein At1g20230... 0.09 OrthoFinder output from all 47 species
Gb_22477 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.05 OrthoFinder output from all 47 species
Gb_22711 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_23018 REME1 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_23084 OTP84 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Gb_24674 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_26130 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_27329 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_28758 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.14 OrthoFinder output from all 47 species
Gb_28765 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_31319 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_33367 No alias RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_34963 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_35407 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_36177 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Gb_36365 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_38504 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_38750 No alias RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_38751 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_40749 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
Gb_41804 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 540 664
IPR002885 Pentatricopeptide_repeat 174 203
IPR002885 Pentatricopeptide_repeat 146 173
IPR002885 Pentatricopeptide_repeat 205 233
IPR002885 Pentatricopeptide_repeat 236 264
IPR002885 Pentatricopeptide_repeat 70 118
IPR002885 Pentatricopeptide_repeat 366 412
IPR002885 Pentatricopeptide_repeat 265 312
No external refs found!