1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_478114g0010

MA_478114g0010 (DCL1, CAF, EMB76,...)


Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1

Description : Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica (sp|q5n870|dcl3a_orysj : 194.0)


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_478114g0010

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000741.29 DCL1, CAF,... Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_13632 ATDCL3, DCL3 endoribonuclease (DCL3). endoribonuclease (DCL4) 0.02 OrthoFinder output from all 47 species
Sam_g04592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 26 138
No external refs found!