Aliases : TCP4, MEE35
Description : transcription factor (TCP)
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00092p00113360 | TCP2,... | RNA biosynthesis.transcriptional activation.TCP... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00135380 | TCP10,... | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G53230 | TCP3 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G02150 | TCP13, TFPD, PTF1 | plastid transcription factor 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G60970 | TCP5 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07355 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07745 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18510 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18903 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48962.t1 | TCP13, TFPD,... | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g22010 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G003200.1 | TCP3, Ceric.01G003200 | TCP-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G069500.1 | TCP2, Ceric.37G069500 | TCP-type transcription factor & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g11506 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011962001 | TCP12, BRC2 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020666001 | TCP4, MEE35 | RNA biosynthesis.transcriptional activation.TCP... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g55750.1 | TCP5, LOC_Os01g55750 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03300 | TCP2 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_547683g0010 | TCP2 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g19590.1 | TCP3 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g20245 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26727 | TCP13, TFPD, PTF1 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0168.g024243 | TCP2 | TCP-type transcription factor & original description: CDS=1-1395 | 0.02 | OrthoFinder output from all 47 species | |
| Smo89227 | TCP2 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g115010.3.1 | TCP5, Solyc03g115010 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g006980.1.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g009900.3.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g069460.3.1 | TCP5, Solyc06g069460 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g15423 | TCP4, MEE35 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03446 | TCP3 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019734_P001 | TCP5, Zm00001e019734 | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 223 | 350 |
| No external refs found! |
