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  5. MA_525649g0010

MA_525649g0010


Description : Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana (sp|q8lds4|nakr1_arath : 95.1)


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_525649g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00251970 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT3G24450 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G38580 HIPP26, FP6, ATFP6 farnesylated protein 6 0.03 OrthoFinder output from all 47 species
AT5G05365 No alias Heavy metal transport/detoxification superfamily protein 0.06 OrthoFinder output from all 47 species
Aev_g25261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38643 HIPP20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12057.t1 Aspi01Gene12057 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19665.t1 Aspi01Gene19665 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19666.t1 Aspi01Gene19666 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50654.t1 Aspi01Gene50654 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53126.t1 Aspi01Gene53126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53126.t2 Aspi01Gene53126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53128.t1 CCH, Aspi01Gene53128 copper chaperone *(ATX/CCH) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g78026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G055100.1 Ceric.10G055100 not classified & original description: pacid=50611673... 0.03 OrthoFinder output from all 47 species
Ceric.17G073300.1 Ceric.17G073300 not classified & original description: pacid=50618274... 0.05 OrthoFinder output from all 47 species
Dde_g06879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30764 HIPP22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022185001 No alias Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species
Gb_16258 No alias Heavy metal-associated isoprenylated plant protein 37... 0.03 OrthoFinder output from all 47 species
Gb_20918 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
LOC_Os03g06080.1 HIPP27, LOC_Os03g06080 Heavy metal-associated isoprenylated plant protein 27... 0.03 OrthoFinder output from all 47 species
Lfl_g28924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40685 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_165810g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_45640g0010 ATX1, ATATX1 copper chaperone (CCH) 0.06 OrthoFinder output from all 47 species
MA_46972g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g20370.1 No alias copper chaperone (CCH) 0.03 OrthoFinder output from all 47 species
Nbi_g04087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018364 No alias not classified & original description: CDS=311-727 0.02 OrthoFinder output from all 47 species
Solyc01g098760.4.1 Solyc01g098760 Heavy metal-associated isoprenylated plant protein 33... 0.04 OrthoFinder output from all 47 species
Solyc02g091300.3.1 HIPP21, Solyc02g091300 Heavy metal-associated isoprenylated plant protein 20... 0.03 OrthoFinder output from all 47 species
Zm00001e008507_P003 HIPP27, Zm00001e008507 Heavy metal-associated isoprenylated plant protein 27... 0.04 OrthoFinder output from all 47 species
Zm00001e015864_P001 Zm00001e015864 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006121 HMA_dom 3 50
No external refs found!