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  5. MA_5571g0010

MA_5571g0010 (ATSYP52, SYP52)


Aliases : ATSYP52, SYP52

Description : SYP5 group Qc-type SNARE protein


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5571g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G16230 No alias Target SNARE coiled-coil domain protein 0.03 OrthoFinder output from all 47 species
Adi_g014635 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Als_g21833 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Dcu_g13902 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013771 No alias Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Spa_g30439 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Tin_g11440 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 174 225
No external refs found!