MA_575g0010


Description : UPF0496 protein 4 OS=Oryza sativa subsp. japonica (sp|q337c0|u496d_orysj : 84.3)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_575g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G01360 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT4G11300 No alias Protein of unknown function (DUF793) 0.04 OrthoFinder output from all 47 species
Adi_g021992 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11557 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08992.t1 Aspi01Gene08992 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68487.t1 BPS1, Aspi01Gene68487 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G029600.1 BPS1, Ceric.22G029600 not classified & original description: pacid=50614632... 0.05 OrthoFinder output from all 47 species
Ceric.28G046900.1 Ceric.28G046900 not classified & original description: pacid=50570300... 0.02 OrthoFinder output from all 47 species
Dde_g00422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g23868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004320 BPS1_pln 69 342
No external refs found!