MA_62865g0010

Description : pectin methylesterase

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_62865g0010
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00028p00077900	QRT1,...	Cell wall.pectin.homogalacturonan.modification and...	0.04	OrthoFinder output from all 47 species
AMTR_s00140p00035900	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
Als_g47598	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g26785	No alias	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g11546	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G017300.1	Ceric.14G017300	pectin methylesterase & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.37G019000.1	Ceric.37G019000	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g05020	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02245	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g12472	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13030	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14386	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Gb_08496	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Len_g56779	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
MA_18312g0010	ATPE11, PE11	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Msp_g08672	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g31349	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c8_460V3.1	Pp3c8_460	Pectin lyase-like superfamily protein	0.01	OrthoFinder output from all 47 species
Solyc01g109740.3.1	ATPE11, PE11,...	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Solyc05g052110.3.1	Solyc05g052110	pectin methylesterase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	61	352

External Links

No external refs found!

MA_62865g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation