MA_67052g0010 (VPS4, SKD1, ATSKD1)

Aliases : VPS4, SKD1, ATSKD1

Description : Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 OS=Arabidopsis thaliana (sp|q9znt0|vps4_arath : 298.0)

Gene families : OG0002846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002846_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_67052g0010

Target	Alias	Description	ECC score	Gene Family Method
Ala_g09447	VPS4, SKD1, ATSKD1	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
Ceric.04G022900.1	VPS4, SKD1,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
Dac_g03336	VPS4, SKD1, ATSKD1	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01036166001	VPS4, SKD1, ATSKD1	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.03	OrthoFinder output from all 47 species
Lfl_g27517	VPS4, SKD1, ATSKD1	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Sam_g37514	No alias	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Spa_g25791	VPS4, SKD1, ATSKD1	EC_3.6 hydrolase acting on acid anhydride & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004143	diacylglycerol kinase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	102	145
IPR015415	Vps4_C	150	214
IPR003959	ATPase_AAA_core	42	77

External Links

No external refs found!