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  5. MA_6870g0010

MA_6870g0010


Description : subfamily ABCB transporter


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6870g0010
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00109790 PGP11,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00128390 PGP16,... ABC transporter B family member 16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G27940 PGP13 P-glycoprotein 13 0.03 OrthoFinder output from all 47 species
AT3G28360 PGP16 P-glycoprotein 16 0.04 OrthoFinder output from all 47 species
Ala_g11046 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16050 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24610 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33802 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18063 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08453.t1 PGP11, Aspi01Gene08453 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14156.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28299.t1 Aspi01Gene28299 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35821.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42787.t1 ATPGP4, PGP4,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42791.t1 PGP21, Aspi01Gene42791 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75977 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G084300.1 ABCB19,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G032800.1 ABCB19,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23401 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32173 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35671 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39907 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41330 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45466 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08658 PGP6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08924 PGP20 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22175 PGP20 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28161 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12010 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13730 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21294 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013125001 PGP2 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_02468 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_02469 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_08615 PGP11 ABC transporter B family member 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_10216 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_33058 ABCB19,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_36503 No alias serine carboxypeptidase. subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_38960 PGP11 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os05g04600.1 PGP11, LOC_Os05g04600 ABC transporter B family member 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g45030.1 PGP1, ABCB1,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Len_g14182 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54677 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03498 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16192 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432169g0010 PGP11 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
MA_145496g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_178534g0010 PGP2 ABC transporter B family member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_18863g0020 PGP3, MDR3 ABC transporter B family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_76406g0010 ATPGP4, PGP4, ABCB4, MDR4 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_82945g0030 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_8519205g0010 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_93218g0010 PGP11 ABC transporter B family member 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9415070g0020 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_9589971g0010 PGP10 ABC transporter B family member 10 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Msp_g17749 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31505 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35589 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36979 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02494 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19207 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30543 PGP18 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35743 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38163 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42482 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04029 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42899 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49419 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56055 PGP21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60074 PGP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65660 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08145 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25857 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30303 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17653 PGP1, ABCB1, ATPGP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60298 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006153 PGP11 subfamily ABCB transporter & original description: CDS=261-4235 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006646 PGP20 subfamily ABCB transporter & original description: CDS=24-3872 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010416 ABCB19,... subfamily ABCB transporter & original description: CDS=327-1289 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197 No alias subfamily ABCB transporter & original description: CDS=1-2220 0.05 OrthoFinder output from all 47 species
Sam_g52431 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo419451 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc03g122070.3.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc12g098840.3.1 PGP11, Solyc12g098840 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Spa_g18839 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26470 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47519 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06701 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12815 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g41085 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020073_P001 ATPGP4, PGP4,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 976 1125
IPR003439 ABC_transporter-like_ATP-bd 385 533
IPR011527 ABC1_TM_dom 73 306
IPR011527 ABC1_TM_dom 681 896
No external refs found!