Aliases : AGO4, OCP11
Description : Protein argonaute 4B OS=Oryza sativa subsp. japonica (sp|q0jf58|ago4b_orysj : 458.0)
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G43810 | PNH, AGO10, ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g10073 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06375 | AGO9 | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05330 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g77990 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g05037 | PNH, AGO10, ZLL | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014252001 | AGO1 | Protein argonaute 1B OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g52550.1 | AGO2, LOC_Os04g52550 | Protein argonaute 3 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18589 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g40869 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g59218 | AGO9 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g18110.1 | AGO1 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g23190.1 | AGO9 | siRNA-integrating factor (AGO) | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g18269 | AGO6 | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_350V3.1 | AGO1, Pp3c17_350 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g18600 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g48869 | AGO5 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g12542 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006941_P001 | AGO2, Zm00001e006941 | siRNA-binding factor (AGO2) of non-canonical RdDM pathway | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e017367_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029696_P001 | AGO1, Zm00001e029696 | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |
