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  5. MA_78251g0010

MA_78251g0010 (AtLa1, La1)


Aliases : AtLa1, La1

Description : La protein 1 OS=Arabidopsis thaliana (sp|q93zv7|la1_arath : 171.0)


Gene families : OG0003172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_78251g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00056900 AtLa1, La1,... La protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G32720 AtLa1, La1 La protein 1 0.06 OrthoFinder output from all 47 species
Aev_g11405 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21508 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11426 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011277 AtLa1, La1 nascent RNA chaperone *(LA) & original description: CDS=135-1643 0.04 OrthoFinder output from all 47 species
Cba_g08492 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G010200.1 AtLa1, La1,... nascent RNA chaperone *(LA) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g09267 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02803 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11687 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035666001 AtLa1, La1 La protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os02g39700.1 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.03 OrthoFinder output from all 47 species
LOC_Os04g42010.1 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.05 OrthoFinder output from all 47 species
Lfl_g25839 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10259599g0010 AtLa1, La1 RNA chaperone (LA). rRNA chaperone (IRP2) 0.03 OrthoFinder output from all 47 species
Mp1g04820.1 AtLa1, La1 RNA chaperone (LA). rRNA chaperone (IRP2) 0.07 OrthoFinder output from all 47 species
Pir_g00573 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c21_14880V3.1 AtLa1, La1, Pp3c21_14880 La protein 1 0.03 OrthoFinder output from all 47 species
Ppi_g04561 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014583 AtLa1, La1 nascent RNA chaperone *(LA) & original description: CDS=169-1488 0.02 OrthoFinder output from all 47 species
Sam_g10339 No alias nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10340 No alias nascent RNA chaperone *(LA) & original description: none 0.05 OrthoFinder output from all 47 species
Smo168828 AtLa1, La1 La protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc08g068310.3.1 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.1 OrthoFinder output from all 47 species
Spa_g09674 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g31164 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015074_P001 AtLa1, La1,... RNA chaperone (LA). rRNA chaperone (IRP2) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR014886 La_xRRM 171 262
No external refs found!