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  5. MA_7940170g0010

MA_7940170g0010 (CPS, ATCPS1, ABC33, CPS1, GA1)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1

Description : Alpha-bisabolene synthase OS=Abies grandis (sp|o81086|tpsd1_abigr : 277.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 29.5)


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_7940170g0010
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00232950 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.05 OrthoFinder output from all 47 species
Adi_g057757 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71568 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75231 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25280 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29132 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29133 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39808 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43202 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Gb_04666 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Gb_05028 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_06621 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.03 OrthoFinder output from all 47 species
Gb_07328 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
Gb_13692 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Gb_25663 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.06 OrthoFinder output from all 47 species
Gb_35203 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
Gb_38468 No alias Monofunctional pimaradiene synthase OS=Pinus banksiana... 0.04 OrthoFinder output from all 47 species
Gb_38471 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.05 OrthoFinder output from all 47 species
Gb_38829 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_39995 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
LOC_Os02g36140.2 KS, KS1, ATKS1,... ent-kaurene synthase 0.06 OrthoFinder output from all 47 species
LOC_Os02g36210.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
LOC_Os02g36264.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g09900.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g10060.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os11g28530.2 KS, KS1, ATKS1,... ent-kaurene synthase 0.02 OrthoFinder output from all 47 species
MA_10433916g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
MA_10435309g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.05 OrthoFinder output from all 47 species
MA_10435706g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
MA_10435715g0010 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Mp2g07200.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase. ent-kaurene synthase 0.03 OrthoFinder output from all 47 species
Mp2g24640.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Nbi_g44147 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14979 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29992 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31982 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35982 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37904 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38612 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06932 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g44158 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49443 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59339 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Smo124329 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.03 OrthoFinder output from all 47 species
Solyc08g005670.2.1 Solyc08g005670 Beta-phellandrene synthase... 0.05 OrthoFinder output from all 47 species
Solyc08g005677.1.1 KS, KS1, ATKS1,... mono-/sesquiterpene-/diterpene synthase. ent-kaurene synthase 0.05 OrthoFinder output from all 47 species
Solyc08g005710.3.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.05 OrthoFinder output from all 47 species
Zm00001e006972_P001 KS, KS1, ATKS1,... mono-/sesquiterpene-/diterpene synthase. ent-kaurene synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 29 157
No external refs found!