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  5. MA_8438g0020

MA_8438g0020


Description : CCT6 subunit zeta of CCT chaperonin folding complex


Gene families : OG0003995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8438g0020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00116290 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00016450 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
AT3G02530 No alias TCP-1/cpn60 chaperonin family protein 0.09 OrthoFinder output from all 47 species
AT5G16070 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Adi_g117522 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Aev_g21281 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Aob_g06615 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Aop_g03812 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Ceric.16G067100.1 Ceric.16G067100 subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.06 OrthoFinder output from all 47 species
Cre09.g397200 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Dac_g39546 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Dcu_g14364 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g04802 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01031067001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
Gb_18443 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.09 OrthoFinder output from all 47 species
LOC_Os05g05470.1 LOC_Os05g05470 CCT6 subunit zeta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Len_g12186 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g01847 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Mp8g07530.1 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Msp_g10126 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Ore_g33910 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.06 OrthoFinder output from all 47 species
Pp3c11_26000V3.1 Pp3c11_26000 TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Sam_g37510 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Solyc02g063090.3.1 Solyc02g063090 CCT6 subunit zeta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Solyc02g085790.3.1 Solyc02g085790 CCT6 subunit zeta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Spa_g18568 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species
Spa_g18569 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Tin_g00936 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e010996_P001 Zm00001e010996 CCT6 subunit zeta of CCT chaperonin folding complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003937 IMP cyclohydrolase activity IEP HCCA
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 12 340
No external refs found!