Aliases : EMB2261
Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 651.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G53600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G26782 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT3G49740 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G14850 | LOI1, MEF11 | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT5G65570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g015809 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g022409 | OTP86 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g061193 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067302 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g07129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07213 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g14128 | CRR2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g27260 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g28645 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g32957 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g40270 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09162 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene33231.t1 | CRR22, Aspi01Gene33231 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene34516.t1 | Aspi01Gene34516 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene43278.t1 | Aspi01Gene43278 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g06936 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19303 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g05109 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g12616 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15109 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g19085 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g25263 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g27999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g29379 | OTP85 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g29399 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g31531 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g32259 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02613 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.17 | OrthoFinder output from all 47 species | |
| Gb_03570 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_04091 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05127 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09794 | No alias | RNA editing factor (MEF7). RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10133 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_10270 | No alias | RNA editing factor (MEF8). RNA editing factor (BLX) | 0.07 | OrthoFinder output from all 47 species | |
| Gb_10985 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11222 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_13599 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_20571 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_20572 | CRR22 | RNA editing factor (CRR21) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_25581 | OTP84 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_27176 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27879 | VAC1, ECB2, ATECB2 | RNA editing factor (ECB2/VAC1) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28762 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30004 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_31162 | REME1 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_41233 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.09 | OrthoFinder output from all 47 species | |
| MA_785826g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16043 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17377 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g01896 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g19660 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41140 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02574 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03036 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09779 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13570 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g27565 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g04466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15720 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20888 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30309 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30310 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05218 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05632 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06423 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06977 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53562 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000505 | CRR2 | not classified & original description: CDS=1-1110 | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g09924 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05928 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05944 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16806 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g45488 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028330_P001 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 353 | 400 |
| IPR002885 | Pentatricopeptide_repeat | 252 | 299 |
| IPR002885 | Pentatricopeptide_repeat | 555 | 602 |
| IPR002885 | Pentatricopeptide_repeat | 151 | 198 |
| IPR002885 | Pentatricopeptide_repeat | 454 | 501 |
| IPR032867 | DYW_dom | 728 | 852 |
| IPR002885 | Pentatricopeptide_repeat | 695 | 724 |
| IPR002885 | Pentatricopeptide_repeat | 630 | 653 |
| IPR002885 | Pentatricopeptide_repeat | 530 | 554 |
| No external refs found! |
