MA_8519205g0010 (PGP17)

Aliases : PGP17

Description : ABC transporter B family member 17 OS=Arabidopsis thaliana (sp|q9lsj6|ab17b_arath : 123.0)

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_8519205g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AT1G27940	PGP13	P-glycoprotein 13	0.04	OrthoFinder output from all 47 species
AT2G39480	PGP6	P-glycoprotein 6	0.04	OrthoFinder output from all 47 species
AT3G55320	PGP20	P-glycoprotein 20	0.02	OrthoFinder output from all 47 species
AT3G62150	PGP21	P-glycoprotein 21	0.03	OrthoFinder output from all 47 species
Ala_g16048	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g24344	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g24610	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene08455.t1	PGP11, Aspi01Gene08455	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene46501.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene52651.t1	PGP2, Aspi01Gene52651	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s2496.g111845	ABCB19,...	subfamily ABCB transporter & original description: CDS=142-3066	0.03	OrthoFinder output from all 47 species
Cba_g59935	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g23401	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g35376	PGP21	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g52100	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g23811	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g30268	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_08707	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_10211	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_13910	PGP2	ABC transporter B family member 2 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os01g18670.1	PGP21, LOC_Os01g18670	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g34970.1	PGP11, LOC_Os01g34970	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os04g38570.1	ABCB19,...	auxin efflux transporter (ABCB19)	0.02	OrthoFinder output from all 47 species
LOC_Os05g47500.1	PGP9, LOC_Os05g47500	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_100742g0020	PGP16	ABC transporter B family member 16 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_10436810g0020	No alias	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
MA_114017g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_144373g0010	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_145446g0020	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_145496g0010	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_178534g0010	PGP2	ABC transporter B family member 2 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
MA_3448627g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_6870g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_9253g0010	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
MA_93218g0010	PGP11	ABC transporter B family member 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_937278g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Msp_g36979	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g22891	PGP13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c21_18190V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species
Ppi_g04001	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197	No alias	subfamily ABCB transporter & original description: CDS=1-2220	0.04	OrthoFinder output from all 47 species
Sam_g27139	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo169182	ATPGP4, PGP4, ABCB4, MDR4	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Tin_g41085	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	60	165

External Links

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MA_8519205g0010 (PGP17)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation