Aliases : EIF3B-2, ATEIF3B-2, EIF3B
Description : Eukaryotic translation initiation factor 3 subunit B OS=Nicotiana tabacum (sp|p56821|eif3b_tobac : 446.0)
Gene families : OG0004558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004558_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00268400 | EIF3B-2,... | Protein biosynthesis.translation... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058261 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08786 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13421 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0538.g076306 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G030700.1 | EIF3B-2,... | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020848.60 | EIF3B-2, ATEIF3B-2, EIF3B | Protein biosynthesis.translation... | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g190100 | EIF3B-2, ATEIF3B-2, EIF3B | Protein biosynthesis.translation... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g11466 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04954 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036012001 | ATTIF3B1,... | Protein biosynthesis.translation... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_06841 | ATTIF3B1,... | component eIF3b of eIF3 mRNA-to-PIC binding complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g41960.1 | ATTIF3B1,... | component eIF3b of eIF3 mRNA-to-PIC binding complex | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06169 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g01306 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10595 | No alias | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g088370.3.1 | EIF3B-2,... | component eIF3b of eIF3 mRNA-to-PIC binding complex | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g08928 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05601 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002405_P001 | ATTIF3B1,... | component eIF3b of eIF3 mRNA-to-PIC binding complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 86 | 140 |
| No external refs found! |
