MA_88112g0010

Description : no hits & (original description: none)

Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_88112g0010

Target	Alias	Description	ECC score	Gene Family Method
Cba_g03733	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.15G009300.1	Ceric.15G009300	E3 ubiquitin ligase & original description:...	0.02	OrthoFinder output from all 47 species
LOC_Os06g46366.1	LOC_Os06g46366	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species
Msp_g26464	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g23516	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023697	No alias	not classified & original description: CDS=460-1119	0.04	OrthoFinder output from all 47 species
Sam_g07919	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g37685	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc11g069350.2.1	Solyc11g069350	RING-v-class E3 ligase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	146	196

External Links

No external refs found!