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  5. MA_893759g0010

MA_893759g0010


Description : anion transporter (NRT1/PTR)


Gene families : OG0000021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_893759g0010
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00148850 ATPTR2, PTR2,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00165p00058610 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AT1G22550 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G27040 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G72125 No alias Major facilitator superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G72130 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G72140 No alias Major facilitator superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G46040 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G46050 ATPTR3, PTR3 peptide transporter 3 0.02 OrthoFinder output from all 47 species
Ala_g22548 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38035 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09836 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56721 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14671 No alias anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24343 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30705 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21977 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10150.t1 NRT1.7, Aspi01Gene10150 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10971 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32143 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G051900.1 PTR1, ATPTR1,... anion transporter *(NRT1/PTR) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.31G039800.1 NRT1.5, Ceric.31G039800 anion transporter *(NRT1/PTR) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11987 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23054 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015523001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
GSVIVT01026070001 No alias Solute transport.carrier-mediated transport.MFS... 0.05 OrthoFinder output from all 47 species
GSVIVT01027876001 ATPTR3, PTR3 Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Gb_01315 No alias anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Gb_20275 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Gb_27114 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Gb_27637 PTR5, ATPTR5 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Gb_41117 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Gb_41118 PTR5, ATPTR5 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
LOC_Os02g48570.1 NRT1.5, LOC_Os02g48570 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
LOC_Os03g60850.1 LOC_Os03g60850 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
LOC_Os10g40600.1 NRT1.1, B-1,... anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Len_g45779 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45925 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50548 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429428g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_107155g0010 No alias anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
MA_107155g0020 No alias anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
MA_22044g0010 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
MA_52162g0010 No alias anion transporter (NRT1/PTR) 0.06 OrthoFinder output from all 47 species
MA_89317g0010 No alias anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Mp3g13820.1 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Mp5g04910.1 PTR5, ATPTR5 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Msp_g24495 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27401 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14957 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14751 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Smo126973 ATPTR2, PTR2,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Smo441824 ATPTR2, PTR2,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Solyc10g024490.2.1 NRT1.5, Solyc10g024490 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Solyc12g042300.2.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Tin_g14608 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002354_P001 NRT1.1, B-1,... anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
Zm00001e005500_P001 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Zm00001e011037_P001 Zm00001e011037 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Zm00001e015532_P001 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Zm00001e023301_P001 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000109 POT_fam 117 284
No external refs found!