MA_9253g0010

Description : subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_9253g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00049p00128080	evm_27.TU.AmTr_v1...	Putative multidrug resistance protein OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
AMTR_s00049p00128390	PGP16,...	ABC transporter B family member 16 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G27940	PGP13	P-glycoprotein 13	0.03	OrthoFinder output from all 47 species
AT1G28010	ABCB14, ATABCB14, PGP14	P-glycoprotein 14	0.03	OrthoFinder output from all 47 species
AT2G39480	PGP6	P-glycoprotein 6	0.03	OrthoFinder output from all 47 species
Adi_g029160	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058585	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g16048	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g16050	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g24610	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g30144	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g11005	PGP11	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g14003	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g18063	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g22258	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g42964	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28299.t1	Aspi01Gene28299	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g17575	PGP6	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.06G076400.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g37248	PGP9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g38327	PGP9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g46173	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g05841	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g22982	PGP11	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g09158	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g28161	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g44934	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13730	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21294	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g23811	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Gb_01718	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_36862	PGP21	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_38960	PGP11	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g50100.1	PGP11, LOC_Os01g50100	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g23455	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03498	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g10739	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g19020	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g33330	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10432169g0010	PGP11	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
MA_1824g0020	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
MA_3437g0010	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
MA_636449g0010	No alias	subfamily ABCB transporter	0.08	OrthoFinder output from all 47 species
MA_6958g0010	PGP21	ABC transporter B family member 21 OS=Arabidopsis...	0.09	OrthoFinder output from all 47 species
MA_82945g0030	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.12	OrthoFinder output from all 47 species
MA_8519205g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mpzg01120.1	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Msp_g44397	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02480	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g32847	PGP21	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19207	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g35743	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g38163	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g04029	PGP11	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g49419	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g57081	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g64430	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g65660	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13619	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29797	PGP6	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g24632	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo148837	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc09g008240.3.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Spa_g06203	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g18839	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26470	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g47519	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12815	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g38947	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g41174	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e017014_P001	ALA2, Zm00001e017014	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	419	567
IPR003439	ABC_transporter-like_ATP-bd	1021	1171
IPR011527	ABC1_TM_dom	88	164
IPR011527	ABC1_TM_dom	833	950
IPR011527	ABC1_TM_dom	722	832
IPR011527	ABC1_TM_dom	165	349

External Links

No external refs found!

MA_9253g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation