1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_9594430g0010

MA_9594430g0010


Description : RNA chaperone (RZ1|GR-RBP)


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9594430g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00073410 evm_27.TU.AmTr_v1... Organelle RRM domain-containing protein 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
Adi_g003608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034694 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078308 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081940 GR-RBP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g121412 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g12109 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38249 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24232 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g41447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04150 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04986 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06469 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27609 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50216.t1 GRP2, ATGRP2,... RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52246.t1 Aspi01Gene52246 RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62878.t1 GRP2, ATGRP2,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene71366.t1 GR-RBP3, Aspi01Gene71366 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g08805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G013000.1 GR-RBP3, Ceric.35G013000 RNA editing factor *(ORRM3) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g03569 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00165 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16014 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17136 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g45661 GR-RBP4, GRP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16014 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25566 CCR1, GR-RBP8,... RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24306 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Len_g06168 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g26500 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24303 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31887 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18367 GR-RBP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37912 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06085 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12344 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12375 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g27813 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31715 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08398 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26099 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25732 ATRZ-1A not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g36205 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 3 40
IPR001878 Znf_CCHC 78 92
No external refs found!