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  5. MA_9839150g0010

MA_9839150g0010 (LBD1)


Aliases : LBD1

Description : transcription factor (AS2/LOB)


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9839150g0010
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00044170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.01 OrthoFinder output from all 47 species
AT1G06280 LBD2 LOB domain-containing protein 2 0.03 OrthoFinder output from all 47 species
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT2G28500 LBD11 LOB domain-containing protein 11 0.05 OrthoFinder output from all 47 species
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT3G03760 LBD20 LOB domain-containing protein 20 0.03 OrthoFinder output from all 47 species
AT3G58190 LBD29, ASL16 lateral organ boundaries-domain 29 0.02 OrthoFinder output from all 47 species
AT5G06080 LBD33 LOB domain-containing protein 33 0.02 OrthoFinder output from all 47 species
Ala_g08616 LOB AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27434 LBD25 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29995 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33932 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03525 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37978 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48421 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05610 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19447 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29461.t1 LOB, Aspi01Gene29461 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41937.t1 AS2, Aspi01Gene41937 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43012.t1 AS2, Aspi01Gene43012 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46359.t1 LBD4, Aspi01Gene46359 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48773.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65362.t1 AS2, Aspi01Gene65362 AS2/LOB-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene69867.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0305.g063899 LBD15, ASL11 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g24489 LOB AS2/LOB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g36506 LOB AS2/LOB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g45920 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06562 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09508 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25272 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43172 LBD20 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12193 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12391 LBD25 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26972 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006269001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01029979001 LBD20 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
Gb_08465 LBD4 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Gb_19390 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_20676 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_23688 LBD15, ASL11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_38978 LBD15, ASL11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_40685 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g14030.1 LBD2, LOC_Os01g14030 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g66590.2 AS2, LOC_Os01g66590 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g05500.1 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g14270.1 LBD18, LOC_Os03g14270 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Lfl_g29029 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_101817g0010 LBD29, ASL16 transcription factor (AS2/LOB) 0.07 OrthoFinder output from all 47 species
MA_113501g0010 LBD12, ASL5, PCK1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_61242g0010 LBD25 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_88659g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g44204 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00488 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25757 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57178 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g21903 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22342 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24707 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25313 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09676 LBD20 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31655 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g091420.2.1 LBD18, Solyc01g091420 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc01g098220.2.1 LBD20, Solyc01g098220 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc06g005090.3.1 LBD11, Solyc06g005090 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc06g050950.3.1 LBD12, ASL5,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc06g082310.3.1 LBD12, ASL5,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc06g082430.2.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc09g066260.4.1 LBD16, ASL18,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc09g066270.3.1 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc11g072470.3.1 LBD1, Solyc11g072470 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Spa_g03009 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000390_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e001031_P001 LBD18, Zm00001e001031 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e016785_P005 LOB, Zm00001e016785 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e019424_P001 LBD15, ASL11,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e038582_P001 LBD18, Zm00001e038582 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e042444_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 15 112
No external refs found!