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  5. ChrSy.fgenesh.mRNA.40

ChrSy.fgenesh.mRNA.40


Description : no hits & (original description: none)


Gene families : OG0000014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrSy.fgenesh.mRNA.40

Target Alias Description ECC score Gene Family Method Actions
Aev_g12969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g45420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00204.t1 Aspi01Gene00204 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01174.t1 Aspi01Gene01174 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12901.t1 Aspi01Gene12901 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38923.t1 Aspi01Gene38923 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59404.t1 Aspi01Gene59404 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61230.t1 Aspi01Gene61230 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g65474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g46463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01414 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_01830 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_18636 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_30376 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_31750 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g07972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c3_35120V3.1 Pp3c3_35120 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g11137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 109 216
IPR041588 Integrase_H2C2 28 85
No external refs found!