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  5. ChrSy.fgenesh.mRNA.52

ChrSy.fgenesh.mRNA.52


Description : no hits & (original description: none)


Gene families : OG0005895 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005895_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrSy.fgenesh.mRNA.52

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g31010.1 LOC_Os01g31010 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g31040.1 LOC_Os01g31040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g30030.1 LOC_Os03g30030 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os03g31542.1 LOC_Os03g31542 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g45734.1 LOC_Os03g45734 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os03g56040.1 LOC_Os03g56040 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os04g16459.1 LOC_Os04g16459 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g34880.1 LOC_Os04g34880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g08660.1 LOC_Os05g08660 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os05g36040.1 LOC_Os05g36040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g21190.1 LOC_Os08g21190 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os08g21410.1 LOC_Os08g21410 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g30050.1 LOC_Os08g30050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g24920.1 LOC_Os10g24920 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g27100.1 LOC_Os11g27100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g31860.1 LOC_Os11g31860 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g21980.1 LOC_Os12g21980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 820 836
IPR005162 Retrotrans_gag_dom 689 730
IPR005162 Retrotrans_gag_dom 82 171
No external refs found!