ChrUn.fgenesh.mRNA.31 (CRK8)


Aliases : CRK8

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 493.0) & Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 75.5)


Gene families : OG0009044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009044_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrUn.fgenesh.mRNA.31

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g29280.1 LOC_Os02g29280 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g19830.1 LOC_Os06g19830 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g02600.1 LOC_Os10g02600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g39460.1 LOC_Os11g39460 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA Interproscan
BP GO:0015074 DNA integration IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 968 1080
IPR025724 GAG-pre-integrase_dom 883 952
IPR001077 O_MeTrfase_dom 137 252
IPR012967 Plant_MeTrfase_dimerisation 34 81
IPR013103 RVT_2 1365 1606
No external refs found!