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  5. ChrUn.fgenesh.mRNA.7

ChrUn.fgenesh.mRNA.7


Description : no hits & (original description: none)


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrUn.fgenesh.mRNA.7

Target Alias Description ECC score Gene Family Method Actions
Aop_g58259 ORF107E not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33064.t1 Aspi01Gene33064 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17806 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.17 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera... 0.13 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.22 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.31 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.34 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.38 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.57 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.11 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.12 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera... 0.13 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.15 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera... 0.1 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.27 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.5 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g02520.1 LOC_Os09g02520 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 707 759
IPR041588 Integrase_H2C2 860 916
IPR000477 RT_dom 592 680
IPR005162 Retrotrans_gag_dom 242 337
No external refs found!