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  5. LOC_Os01g01340.1

LOC_Os01g01340.1 (CCL, LOC_Os01g01340)


Aliases : CCL, LOC_Os01g01340

Description : LIR1 protein involved in ferredoxin-NADP oxidoreductase regulation


Gene families : OG0007865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01340.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00166750 CCL,... Photosynthesis.photophosphorylation.linear electron... 0.06 OrthoFinder output from all 47 species
AT3G26740 CCL CCR-like 0.05 OrthoFinder output from all 47 species
Ala_g09691 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Als_g62894 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Aob_g28012 No alias regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Cba_g26580 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Ceric.17G033800.1 Ceric.17G033800 regulatory protein *(LIR1) of ferredoxin-NADP... 0.05 OrthoFinder output from all 47 species
Ceric.21G010900.1 Ceric.21G010900 not classified & original description: pacid=50603807... 0.05 OrthoFinder output from all 47 species
Ehy_g07253 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
GSVIVT01004944001 CCL Photosynthesis.photophosphorylation.linear electron... 0.04 OrthoFinder output from all 47 species
Lfl_g06887 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.05 OrthoFinder output from all 47 species
Msp_g19440 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Nbi_g24400 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Ore_g04797 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
Ore_g32365 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.04 OrthoFinder output from all 47 species
Ppi_g46808 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Sam_g26362 No alias regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Smo444139 No alias Photosynthesis.photophosphorylation.linear electron... 0.08 OrthoFinder output from all 47 species
Solyc09g092110.4.1 CCL, Solyc09g092110 LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.02 OrthoFinder output from all 47 species
Spa_g03469 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.06 OrthoFinder output from all 47 species
Spa_g03470 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.03 OrthoFinder output from all 47 species
Tin_g00199 CCL regulatory protein *(LIR1) of ferredoxin-NADP... 0.02 OrthoFinder output from all 47 species
Zm00001e017178_P001 CCL, Zm00001e017178 LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR009856 Lir1 1 127
No external refs found!